RNAJunction Database - Junction Profile:12916

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12916: 1K9W_k2_C-G7_D-G7

Primary Citation: (from PDB entry 1K9W)

E.ENNIFAR P.WALTER B.EHRESMANN C.EHRESMANN P.DUMAS CRYSTAL STRUCTURES OF COAXIALLY-STACKED KISSING COMPLEXES OF THE HIV-1 RNA DIMERIZATION INITIATION SITE NAT.STRUCT.BIOL. V. 8 1064 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Kissing-loopCluster:2B8S k2 A-G7 B-G7 
NC-IUBMB Classification:N/ACluster Page
Angles: 167°
Fit Criteria: A
Extracted Structure:Download

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: CUGAGGUGCACACAG 15nt

Strand 2: Chain D: CUGAGGUGCACACAG 15nt

Valid XHTML 1.0 Transitional