RNAJunction Database - Junction Profile:1407
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1407: 1J5A_j2_A-G215_A-G231

Primary Citation: (from PDB entry 1J5A)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1JZX j2 A-G215 A-G231 
NC-IUBMB Classification:HS4HS5Cluster Page
Angles: 135°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.80546Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCGUUAGUAGC 11nt

Strand 2: Chain A: GCGAACCCGG 10nt

Valid XHTML 1.0 Transitional