RNAJunction Database - Junction Profile:162
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 162: 1DDY_j2_E-A414_E-C429

Primary Citation: (from PDB entry 1DDY)

D.SUSSMAN J.C.NIX C.WILSON THE STRUCTURAL BASIS FOR MOLECULAR RECOGNITION BY THE VITAMIN B12 RNA APTAMER NAT.STRUCT.BIOL. V. 7 53 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1DDY j2 C-A214 C-C229 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 118°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.86422Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain E: CAUAAC 6nt

Strand 2: Chain E: GCGAG 5nt

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