RNAJunction Database - Junction Profile:186
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 186: 1EBR_j2_A-G8_A-G20

Primary Citation: (from PDB entry 1EBR)

R.D.PETERSON J.FEIGON STRUCTURAL CHANGE IN REV RESPONSIVE ELEMENT RNA OF HIV-1 ON BINDING REV PEPTIDE J.MOL.BIOL. V. 264 863 1996

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1CSL j2 A-G50 B-G67 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 172°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.42076Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUGACGG 7nt

Strand 2: Chain A: GCGCAG 6nt

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