RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 196: 1ETF_j2_A-G47_A-G67

Primary Citation: (from PDB entry 1ETF)

J.L.BATTISTE H.MAO N.S.RAO R.TAN D.R.MUHANDIRAM L.E.KAY A.D.FRANKEL J.R.WILLAMSON ALPHA HELIX-RNA MAJOR GROOVE RECOGNITION IN AN HIV-1 REV PEPTIDE-RRE RNA COMPLEX SCIENCE V. 273 1547 1996

Experimental Method:

Structure Images

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Derived Information

Type:	Bulge Loop	Cluster:	1DUQ j2 A-G105 B-G120
NC-IUBMB Classification:	HS3HS5		Cluster Page
Angles:	158°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.79416Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUGACGGUACA 11nt

Strand 2: Chain A: UGGGCGCAG 9nt