RNAJunction Database - Junction Profile:2134

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2134: 1K73_j2_A-U548_A-C606

Primary Citation: (from PDB entry 1K73)

J.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQL j2 0-U548 0-C606 
NC-IUBMB Classification:HS1HS4Cluster Page
Angles: 162°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.7543Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AUACAAGG 8nt

Strand 2: Chain A: CCGAU 5nt

Valid XHTML 1.0 Transitional