RNAJunction Database - Junction Profile:22
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 22: 1BYJ_j2_A-G4_A-G19

Primary Citation: (from PDB entry 1BYJ)

S.YOSHIZAWA D.FOURMY J.D.PUGLISI STRUCTURAL ORIGINS OF GENTAMICIN ANTIBIOTIC ACTION EMBO J. V. 17 6437 1998

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1ZZ5 j2 A-G7 B-G24 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 152°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.93266Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUGAAGUCGC 10nt

Strand 2: Chain A: GCGUCACAC 9nt

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