RNAJunction Database - Junction Profile:2293
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2293: 1K8A_j7_A-A912_A-G928_A-U1041_A-C1069_A-A1086_A-C1267_A-A1286

Primary Citation: (from PDB entry 1K8A)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:7-wayCluster:1KC8 j7 A-A912 A-G928 A-U1041 A-C1069 A-A1086 A-C1267 A-A1286 
NC-IUBMB Classification:Cluster Page
Angles: 31:41:41:41:64:64:66:76:91:101:102:104:119:123:130:130:135:141:143:156:165°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.59724Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AUGACC 6nt

Strand 2: Chain A: CGAAACAU 8nt

Strand 3: Chain A: GAUUCCGGU 9nt

Strand 4: Chain A: ACCAGGAGG 9nt

Strand 5: Chain A: CCAGAGAU 8nt

Strand 6: Chain A: GUCCGUAC 8nt

Strand 7: Chain A: GUAAUCGAGUAG 12nt

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