RNAJunction Database - Junction Profile:2425
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2425: 1KC8_j2_A-C1578_A-G1614

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1Q82 j2 A-C1578 A-G1614 
NC-IUBMB Classification:HS2HS3Cluster Page
Angles: 152°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.47496Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACGAACGGC 9nt

Strand 2: Chain A: GUCCAACU 8nt

Valid XHTML 1.0 Transitional