RNAJunction Database - Junction Profile:2480
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2480: 1KC8_j2_A-U2545_A-G2606

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1YIJ j2 0-U2545 0-G2606 
NC-IUBMB Classification:HS2HS6Cluster Page
Angles: 166°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.96775Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGGUCGUGAGCU 12nt

Strand 2: Chain A: GGUUCCCU 8nt

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