RNAJunction Database - Junction Profile:2727
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2727: 1KQS_j2_0-U548_0-A602

Primary Citation: (from PDB entry 1KQS)

T.M.SCHMEING A.C.SEILA J.L.HANSEN B.FREEBORN J.K.SOUKUP S.A.SCARINGE S.A.STROBEL P.B.MOORE T.A.STEITZ A PRE-TRANSLOCATIONAL INTERMEDIATE IN PROTEIN SYNTHESIS OBSERVED IN CRYSTALS OF ENZYMATICALLY ACTIVE 50S SUBUNITS NAT.STRUCT.BIOL. V. 9 225 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1M1K j2 A-U548 A-A602 
NC-IUBMB Classification:HS5HS6Cluster Page
Angles: 49°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.64664Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CAUACAAGGUCC 12nt

Strand 2: Chain 0: GGAAGCCGAUG 11nt

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