RNAJunction Database - Junction Profile:2908
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2908: 1M1K_j5_A-A2095_A-G2481_A-U2531_A-U2615_A-C2641

Primary Citation: (from PDB entry 1M1K)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1Q82 j5 A-A2095 A-G2481 A-U2531 A-U2615 A-C2641 
NC-IUBMB Classification:Cluster Page
Angles: 18:25:27:44:112:129:132:150:156:172°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.74508Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGGGAUAACAGAGU 14nt

Strand 2: Chain A: GGAAGCGAAGACCCU 15nt

Strand 3: Chain A: GCUACCUCGAUGUCGGU 17nt

Strand 4: Chain A: GCUGGGUUUAGAC 13nt

Strand 5: Chain A: GUCGGCUGCUAUCU 14nt

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