RNAJunction Database - Junction Profile:2931
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2931: 1M5O_j2_B-G21_B-U60

Primary Citation: (from PDB entry 1M5O)

P.B.RUPERT A.P.MASSEY S.T.SIGURDSSON A.R.FERRE-D'AMARE TRANSITION STATE STABILIZATION BY A CATALYTIC RNA SCIENCE V. 298 1421 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2BCY j2 C-G21 D-U41 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 155°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.59412Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: AUUAC 5nt

Strand 2: Chain B: AGAA 4nt

Valid XHTML 1.0 Transitional