RNAJunction Database - Junction Profile:317
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 317: 1FFK_j4_0-U27_0-C480_0-G503_0-A509

Primary Citation: (from PDB entry 1FFK)

N.BAN P.NISSEN J.HANSEN P.B.MOORE T.A.STEITZ THE COMPLETE ATOMIC STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT AT 2.4 A RESOLUTION SCIENCE V. 289 905 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:1YI2 j4 0-U27 0-C480 0-G503 0-A509 
NC-IUBMB Classification:Cluster Page
Angles: 59:73:117:130:143:149°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.93462Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCUGCAAAGUAC 12nt

Strand 2: Chain 0: UUGC 4nt

Strand 3: Chain 0: AGGCG 5nt

Strand 4: Chain 0: AAUAGAGCAU 10nt

Valid XHTML 1.0 Transitional