RNAJunction Database - Junction Profile:3588
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3588: 1NJI_j2_A-U2557_A-C2575

Primary Citation: (from PDB entry 1NJI)

J.L.HANSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1YIJ j2 0-U2557 0-C2575 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 141°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.01984Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGCAAGGG 8nt

Strand 2: Chain A: CCUGCC 6nt

Valid XHTML 1.0 Transitional