RNAJunction Database - Junction Profile:3641
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3641: 1NJM_j2_0-C1009_0-G1165

Primary Citation: (from PDB entry 1NJM)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1JZZ j2 A-C1009 A-G1165 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 163°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.7431Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCUAAG 6nt

Strand 2: Chain 0: CGAAGC 6nt

Valid XHTML 1.0 Transitional