RNAJunction Database - Junction Profile:3674

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3674: 1NJM_j2_0-C615_0-C629

Primary Citation: (from PDB entry 1NJM)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NJP j2 0-C615 0-C629 
NC-IUBMB Classification:HS4HS4Cluster Page
Angles: 156°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.07279Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCUUAAGU 8nt

Strand 2: Chain 0: ACGGAGGC 8nt

Valid XHTML 1.0 Transitional