RNAJunction Database - Junction Profile:3736

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3736: 1NJM_j3_0-C1319_0-G1351_0-G1617

Primary Citation: (from PDB entry 1NJM)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1J5A j3 A-C1319 A-G1351 A-G1617 
NC-IUBMB Classification:Cluster Page
Angles: 72:89:156°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.29866Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AGGGAAAGUCGG 12nt

Strand 2: Chain 0: GACAAGGGUUCCU 13nt

Strand 3: Chain 0: CCGUACCGCAAACCGACACAGGUGUC 26nt

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