RNAJunction Database - Junction Profile:3765
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3765: 1NJM_j5_0-C593_0-A681_0-G822_0-G1209_0-G1263

Primary Citation: (from PDB entry 1NJM)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1JZZ j5 A-C593 A-A681 A-G822 A-G1209 A-G1263 
NC-IUBMB Classification:Cluster Page
Angles: 61:67:85:88:103:108:111:114:158:164°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.33535Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: UAGACU 6nt

Strand 2: Chain 0: GCGACUUA 8nt

Strand 3: Chain 0: AGUUCU 6nt

Strand 4: Chain 0: AGCG 4nt

Strand 5: Chain 0: UGCGGAUGC 9nt

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