RNAJunction Database - Junction Profile:3947
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3947: 1NJO_j2_0-C299_0-A360

Primary Citation: (from PDB entry 1NJO)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1PNY j2 0-C299 0-A360 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 173°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.44953Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CCCCUC 6nt

Strand 2: Chain 0: GAGCGG 6nt

Valid XHTML 1.0 Transitional