RNAJunction Database - Junction Profile:4133
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4133: 1NJP_j2_0-U2064_0-U2211

Primary Citation: (from PDB entry 1NJP)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NJO j2 0-U2064 0-U2211 
NC-IUBMB Classification:HS5HS6Cluster Page
Angles: 151°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.85318Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCUUGGCGGGUA 12nt

Strand 2: Chain 0: UAUAGUCUGGC 11nt

Valid XHTML 1.0 Transitional