RNAJunction Database - Junction Profile:4181
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4181: 1NKW_j2_0-A55_0-G108

Primary Citation: (from PDB entry 1NKW)

J.M.HARMS F.SCHLUENZEN R.ZARIVACH A.BASHAN S.GAT I.AGMON H.BARTELS F.FRANCESCHI A.YONATH HIGH RESOLUTION STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM A MESOPHILIC EUBACTERIUM CELL (CAMBRIDGE,MASS.) V. 107 679 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1J5A j2 A-A55 A-G108 
NC-IUBMB Classification:HS3HS19Cluster Page
Angles: 131°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.27615Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGACGCGAUUACCUGCGAAAAGCCC 25nt

Strand 2: Chain 0: GGGAUGUCC 9nt

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