RNAJunction Database - Junction Profile:4312
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4312: 1P5P_j2_A-U19_A-G63

Primary Citation: (from PDB entry 1P5P)

P.J.LUKAVSKY I.KIM G.A.OTTO J.D.PUGLISI STRUCTURE OF HCV IRES DOMAIN II DETERMINED BY NMR. NAT.STRUCT.BIOL. V. 10 1033 2003

Experimental Method: NMR

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1P5M j2 A-U19 A-G41 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 164°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.94891Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UCGUGCA 7nt

Strand 2: Chain A: UGUCUU 6nt

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