RNAJunction Database - Junction Profile:4568
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4568: 1PNU_j2_9-U82_9-C97

Primary Citation: (from PDB entry 1PNU)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1PNY j2 9-U82 9-C97 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 158°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.70777Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 9: ACUCGGA 7nt

Strand 2: Chain 9: UCCCGGA 7nt

Valid XHTML 1.0 Transitional