RNAJunction Database - Junction Profile:4599
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4599: 1PNX_j2_A-A448_A-U480

Primary Citation: (from PDB entry 1PNX)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1PNS j2 A-A448 A-U480 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 140°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.18221Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACUGACGGUAC 11nt

Strand 2: Chain A: GGACGAAAC 9nt

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