RNAJunction Database - Junction Profile:4660
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4660: 1PNY_j2_0-C1364_0-G1390

Primary Citation: (from PDB entry 1PNY)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NJO j2 0-C1364 0-G1390 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 166°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.86377Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CCUAAG 6nt

Strand 2: Chain 0: CGAUGG 6nt

Valid XHTML 1.0 Transitional