RNAJunction Database - Junction Profile:5296
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5296: 1QVF_j2_0-U2557_0-C2575

Primary Citation: (from PDB entry 1QVF)

T.M.SCHMEING P.B.MOORE T.A.STEITZ STRUCTURES OF DEACYLATED TRNA MIMICS BOUND TO THE E SITE OF THE LARGE RIBOSOMAL SUBUNIT RNA V. 9 1345 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1YIJ j2 0-U2557 0-C2575 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 140°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.95536Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGCAAGGG 8nt

Strand 2: Chain 0: CCUGCC 6nt

Valid XHTML 1.0 Transitional