RNAJunction Database - Junction Profile:5499
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5499: 1S03_j2_B-G9_B-C39

Primary Citation: (from PDB entry 1S03)

H.J.MERIANOS J.WANG P.B.MOORE THE STRUCTURE OF A RIBOSOMAL PROTEIN S8/SPC OPERON MRNA COMPLEX. RNA V. 10 954 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1S03 j2 A-G9 A-C39 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 169°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.72442Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GGCGA 5nt

Strand 2: Chain B: UCCC 4nt

Valid XHTML 1.0 Transitional