RNAJunction Database - Junction Profile:5662

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5662: 1S1I_j4_3-A914_3-G928_3-U1041_3-C1069

Primary Citation: (from PDB entry 1S1I)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1VQL j4 0-A914 0-G928 0-U1041 0-C1069 
NC-IUBMB Classification:Cluster Page
Angles: 39:40:125:156:158:161°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.89572Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 3: UGAC 4nt

Strand 2: Chain 3: AACA 4nt

Strand 3: Chain 3: AUUCCGG 7nt

Strand 4: Chain 3: CCAG 4nt

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