RNAJunction Database - Junction Profile:5676
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5676: 1S34_j2_A-G912_A-C923

Primary Citation: (from PDB entry 1S34)

J.CABELLO-VILLEGAS K.E.GILES A.M.SOTO P.YU K.L.BEEMON Y.X.WANG SOLUTION STRUCTURE OF THE PSEUDO-5' SPLICE SITE OF A RETROVIRAL SPLICING SUPPRESSOR. RNA V. 10 1388 2004

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1S2F j2 A-G912 A-C923 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 165°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.52841Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAGUGGU 7nt

Strand 2: Chain A: AUCCUU 6nt

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