RNAJunction Database - Junction Profile:5830

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5830: 1SM1_j3_0-C1319_0-G1351_0-G1617

Primary Citation: (from PDB entry 1SM1)

J.M.HARMS F.SCHLUENZEN P.FUCINI H.BARTELS A.YONATH ALTERATIONS AT THE PEPTIDYL TRANSFERASE CENTRE OF THE RIBOSOME INDUCED BY THE SYNERGISTIC ACTION OF THE STREPTOGRAMINS DALFOPRISTIN AND QUINUPRISTIN. BMC BIOL. V. 2 4 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1J5A j3 A-C1319 A-G1351 A-G1617 
NC-IUBMB Classification:Cluster Page
Angles: 72:88:157°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.21987Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AGGGAAAGUCGG 12nt

Strand 2: Chain 0: GACAAGGGUUCCU 13nt

Strand 3: Chain 0: CCGUACCGCAAACCGACACAGGUGUC 26nt

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