RNAJunction Database - Junction Profile:5851
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5851: 1U63_j2_D-U16_D-G28

Primary Citation: (from PDB entry 1U63)

N.NEVSKAYA S.TISHCHENKO A.GABDOULKHAKOV E.NIKONOVA O.NIKONOV A.NIKULIN M.GARBER S.NIKONOV W.PIENDL RIBOSOMAL PROTEIN L1 RECOGNIZES THE SAME SPECIFIC STRUCTURAL MOTIF IN ITS TARGET SITES ON THE AUTOREGULATORY MRNA AND 23S RRNA. NUCLEIC ACIDS RES. V. 33 478 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1U63 j2 B-U16 B-G28 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 160°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.61021Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain D: GCGAAGC 7nt

Strand 2: Chain D: GCUCGC 6nt

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