RNAJunction Database - Junction Profile:5893
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5893: 1VOQ_j2_A-C63_A-C103

Primary Citation: (from PDB entry 1VOQ)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2B9M j2 A-C63 A-C103 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 171°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.00223Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UCGUGC 6nt

Strand 2: Chain A: GCGG 4nt

Valid XHTML 1.0 Transitional