RNAJunction Database - Junction Profile:6131
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6131: 1VOV_j2_A-U375_A-U387

Primary Citation: (from PDB entry 1VOV)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VOQ j2 A-U375 A-U387 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 172°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.91446Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CUGAC 5nt

Strand 2: Chain A: AUGG 4nt

Valid XHTML 1.0 Transitional