RNAJunction Database - Junction Profile:632

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 632: 1HNW_j4_A-G22_A-C556_A-C883_A-C912

Primary Citation: (from PDB entry 1HNW)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2J02 j4 A-G22 A-C556 A-C883 A-C912 
NC-IUBMB Classification:Cluster Page
Angles: 46:66:69:134:143:156°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.62491Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCCGGAUUCACUGGGC 16nt

Strand 2: Chain A: UGGCUCAGGG 10nt

Strand 3: Chain A: GCCUGGG 7nt

Strand 4: Chain A: CUCAAA 6nt

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