RNAJunction Database - Junction Profile:636
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 636: 1HNW_j5_A-U37_A-C403_A-C436_A-U495_A-C545

Primary Citation: (from PDB entry 1HNW)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1FJG j5 A-U37 A-C403 A-C436 A-U495 A-C545 
NC-IUBMB Classification:Cluster Page
Angles: 9:53:53:83:92:97:98:107:133:142°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.83991Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUUGG 6nt

Strand 2: Chain A: CUGGC 5nt

Strand 3: Chain A: CCUGAA 6nt

Strand 4: Chain A: GUAAUAGC 8nt

Strand 5: Chain A: GCGAG 5nt

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