RNAJunction Database - Junction Profile:6372
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6372: 1VP0_j2_B-A168_B-U179

Primary Citation: (from PDB entry 1VP0)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VOR j2 B-A168 B-U179 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 142°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.76968Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: AACUG 5nt

Strand 2: Chain B: CUCAG 5nt

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