RNAJunction Database - Junction Profile:6378
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6378: 1VP0_j2_B-C1009_B-G1165

Primary Citation: (from PDB entry 1VP0)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1JZX j2 A-C1009 A-G1165 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 163°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.44885Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: AGCUAAGG 8nt

Strand 2: Chain B: CCGAAGCU 8nt

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