RNAJunction Database - Junction Profile:6412

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6412: 1VP0_j3_B-C1319_B-G1622_B-G1636

Primary Citation: (from PDB entry 1VP0)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1JZZ j3 A-C1319 A-G1622 A-G1636 
NC-IUBMB Classification:Cluster Page
Angles: 48:132:162°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.28232Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: CGCAAACC 8nt

Strand 2: Chain B: ACAAG 5nt

Strand 3: Chain B: GGUGU 5nt

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