RNAJunction Database - Junction Profile:6632
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6632: 1VQ5_j4_0-U27_0-C480_0-G503_0-A509

Primary Citation: (from PDB entry 1VQ5)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1YI2 j4 0-U27 0-C480 0-G503 0-A509 
NC-IUBMB Classification:Cluster Page
Angles: 56:76:115:132:142:148°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.59529Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GCUGCAAAGUAC 12nt

Strand 2: Chain 0: UUGC 4nt

Strand 3: Chain 0: AGGCG 5nt

Strand 4: Chain 0: AAUAGAGCAU 10nt

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