RNAJunction Database - Junction Profile:6648
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6648: 1VQ6_j2_0-A793_0-A819

Primary Citation: (from PDB entry 1VQ6)

T.M.SCHMEING T.A.STEITZ AN INDUCED-FIT MECHANISM TO PROMOTE PEPTIDE BOND FORMATION AND EXCLUDE HYDROLYSIS OF PEPTIDYL-TRNA NATURE V. 438 520 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQL j2 0-A793 0-A819 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 159°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.65628Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GAAGUCU 7nt

Strand 2: Chain 0: AGAUGA 6nt

Valid XHTML 1.0 Transitional