RNAJunction Database - Junction Profile:675
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 675: 1HNX_j2_A-U133_A-G227

Primary Citation: (from PDB entry 1HNX)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1IBL j2 A-U133 A-G227 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 174°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.60367Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCUACCCG 8nt

Strand 2: Chain A: CGGAUGG 7nt

Valid XHTML 1.0 Transitional