RNAJunction Database - Junction Profile:6789

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6789: 1VQ7_j2_0-G2865_0-U2889

Primary Citation: (from PDB entry 1VQ7)

T.M.SCHMEING T.A.STEITZ AN INDUCED-FIT MECHANISM TO PROMOTE PEPTIDE BOND FORMATION AND EXCLUDE HYDROLYSIS OF PEPTIDYL-TRNA NATURE V. 438 520 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1JJ2 j2 0-G2865 0-U2889 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 121°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.67187Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GUGUGCGC 8nt

Strand 2: Chain 0: GUUAAGC 7nt

Valid XHTML 1.0 Transitional