RNAJunction Database - Junction Profile:6934
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6934: 1VQ8_j2_9-G3086_9-C3095

Primary Citation: (from PDB entry 1VQ8)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQK j2 9-G3086 9-C3095 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 146°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.95194Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 9: GAGUGCG 7nt

Strand 2: Chain 9: AGCCUC 6nt

Valid XHTML 1.0 Transitional