RNAJunction Database - Junction Profile:7043
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7043: 1VQ9_j2_0-U548_0-C606

Primary Citation: (from PDB entry 1VQ9)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQL j2 0-U548 0-C606 
NC-IUBMB Classification:HS1HS4Cluster Page
Angles: 164°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.71702Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AUACAAGG 8nt

Strand 2: Chain 0: CCGAU 5nt

Valid XHTML 1.0 Transitional