RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7429: 1VQM_j7_0-A912_0-G928_0-U1041_0-C1069_0-A1086_0-C1267_0-A1286

Primary Citation: (from PDB entry 1VQM)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information

Type:	7-way	Cluster:	1KC8 j7 A-A912 A-G928 A-U1041 A-C1069 A-A1086 A-C1267 A-A1286
NC-IUBMB Classification:			Cluster Page
Angles:	30:39:41:42:61:65:66:75:92:101:101:104:118:125:130:132:134:142:144:155:166°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.56377Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AUGACC 6nt

Strand 2: Chain 0: CGAAACAU 8nt

Strand 3: Chain 0: GAUUCCGGU 9nt

Strand 4: Chain 0: ACCAGGAGG 9nt

Strand 5: Chain 0: CCAGAGAU 8nt

Strand 6: Chain 0: GUCCGUAC 8nt

Strand 7: Chain 0: GUAAUCGAGUAG 12nt