RNAJunction Database - Junction Profile:7766
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7766: 1VQP_j5_0-A912_0-G1071_0-A1088_0-C1267_0-G1290

Primary Citation: (from PDB entry 1VQP)

T.M.SCHMEING T.A.STEITZ STRUCTURAL INSIGHTS INTO THE ROLES OF WATER AND THE 2' HYDROXYL OF THE P SITE TRNA IN THE PEPTIDYL TRANSFERASE REACTION. MOL.CELL V. 20 437 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1JJ2 j5 0-A912 0-G1071 0-A1088 0-C1267 0-G1290 
NC-IUBMB Classification:Cluster Page
Angles: 10:43:45:52:124:128:134:137:171:179°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.78811Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AGGA 4nt

Strand 2: Chain 0: GAAA 4nt

Strand 3: Chain 0: GAGA 4nt

Strand 4: Chain 0: UCCG 4nt

Strand 5: Chain 0: CGAGUA 6nt

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