RNAJunction Database - Junction Profile:7865

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7865: 1VS6_j2_B-G738_B-G757

Primary Citation: (from PDB entry 1VS6)

B.S.SCHUWIRTH A.VILA-SANJURJO J.H.D.CATE STRUCTURAL ANALYSIS OF KASUGAMYCIN INHIBITION OF TRANSLATION. NAT.STRUCT.MOL.BIOL. V. 13 879 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2I2V j2 B-G738 B-G757 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 164°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.5142Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: CCGACUA 7nt

Strand 2: Chain B: UAGCGG 6nt

Valid XHTML 1.0 Transitional