RNAJunction Database - Junction Profile:7884
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7884: 1VS6_j3_B-G1770_B-G1828_B-U1976

Primary Citation: (from PDB entry 1VS6)

B.S.SCHUWIRTH A.VILA-SANJURJO J.H.D.CATE STRUCTURAL ANALYSIS OF KASUGAMYCIN INHIBITION OF TRANSLATION. NAT.STRUCT.MOL.BIOL. V. 13 879 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:2I2V j3 B-G1770 B-G1828 B-U1976 
NC-IUBMB Classification:Cluster Page
Angles: 16:170:173°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.99791Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GUGACG 6nt

Strand 2: Chain B: CUGCAACUGUUUAUUAAAAACACAGC 26nt

Strand 3: Chain B: CGUAAUGAUGG 11nt

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