RNAJunction Database - Junction Profile:8075
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8075: 1W2B_j5_0-A2095_0-G2481_0-U2531_0-U2615_0-C2641

Primary Citation: (from PDB entry 1W2B)

L.FERBITZ T.MAIER H.PATZELT B.BUKAU E.DEUERLING N.BAN TRIGGER FACTOR IN COMPLEX WITH THE RIBOSOME FORMS A MOLECULAR CRADLE FOR NASCENT PROTEINS NATURE V. 431 590 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1Q82 j5 A-A2095 A-G2481 A-U2531 A-U2615 A-C2641 
NC-IUBMB Classification:Cluster Page
Angles: 20:27:27:44:111:130:132:152:155:170°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.09549Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AGGGAUAACAGAGU 14nt

Strand 2: Chain 0: GGAAGCGAAGACCCU 15nt

Strand 3: Chain 0: GCUACCUCGAUGUCGGU 17nt

Strand 4: Chain 0: GCUGGGUUUAGAC 13nt

Strand 5: Chain 0: GUCGGCUGCUAUCU 14nt

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